Desmond-Related Publications

An overview of the Desmond software can be found in the following paper, which won the "Best Paper Award" at the 2006 ACM/IEEE Conference on Supercomputing (SC06). If you'd like to cite Desmond in a publication, here's the reference that should be used:

Further details about the performance of Desmond, the algorithms and implementation techniques used in Desmond, as well as application studies using Desmond, can be found in the following papers:

Performance

Parallelization methods

Numerical methods

Long-range electrostatics

Applications using Desmond

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